11th Annual Conference
2021
The 11th Annual Ohio River Valley Cytometry Association Meeting
Imaging and Cytometry Research Day
Tuesday, August 21, 2021
Virtual Conference
9:00am-1:00pm EST
Keynote Speaker
Nima Aghaeepour, PhD
Assistant Professor
Artificial Intelligence, Machine Learning, and Multiomics Integration for Translational Medicine
Stanford Medicine
Recent technological advances in science provide novel opportunities to unravel the complex biology of pregnancy. Immunological changes during pregnancy are highly dynamic and involve multiple interconnected biological systems. An ongoing cohort study by the Prematurity Research Center at Stanford University exploits recent technological advances to examine the transcriptomic, microbiome, and proteomic events associated with normal and pathological pregnancies. We will discuss a machine learning algorithm that will integrate mass cytometry data into this multiomics setting. This computational pipeline can increase predictive power and reveal new biology, by combining datasets of various sizes and modularities in a balanced manner. We will next demonstrate how this model can be used to study preterm birth, the leading cause of death in children under 5 years old.
Featured Speaker
Bartek Rajwa, PhD
Associate Professor,
Computational Life Sciences in the Bindley Bioscience Center
Purdue University
Despite the ongoing focus on mapping the central nervous system (CNS) connectome, the peripheral nervous system (PNS) architecture in general, and enteric nervous system (ENS) in particular, has been largely disregarded. Besides the studies performed using simple biological models, not much effort has been directed towards describing, quantifying, modeling, and understanding the topology and architecture of the PNS. This presentation will describe the work on mathematical characterization and generative modeling of PNS, focusing on modeling interganglionic networks in the colon and arrangements of axons in the vagus nerve. The study uses data from images of human and mouse tissue samples obtained through optical (confocal) and electron microscopy. The developed models use spatial point pattern analysis and graph generation tools to characterize the spatial and topological properties of the nerve fascicles in the vagus as well as ganglia (clusters of neurons and glial cells) and the inter-ganglionic connections in the colon. Specifically, the introduced approach employed a hybrid hardcore-Strauss process for describing and modeling spatial patterns and a planar random graph generation for constructing the spatially embedded network. The results show that proposed generative models may be helpful in both basic and translational studies and are sufficiently expressive to describe the nerve architectures of animals and humans who vary in age and health status. An increased understanding of the PNS architecture and connectome will lead to the advancement of neuromodulation strategies in treatment. It will also clarify anatomic diagnostic criteria for people with bowel and stomach motility disorders.
Local Speaker
Tamara Tilburgs, PhD
Assistant Professor
Division of Immunobiology
Cincinnati Children’s Hospital
The focus of the Tilburgs lab is to investigate how human maternal immune cells establish immune tolerance to foreign fetal and placental tissues and at the same time maintain immunity to viral and bacterial infections. The key question in this immune paradox is how fetal extravillous trophoblasts (EVT) invade maternal tissues in the uterus where they interact with an abundance of maternal leucocytes and do not get rejected. To study maternal immune cells, fetal trophoblasts and their interactions the lab largely depends on flow cytometry based approaches to purify placental immune populations and perform functional assessment cell types including regulatory T cells suppression assays and degranulation and cytokine secretion assays. High dimensional spectral flow cytometry and computational approaches are being used to investigate placental T cells and demonstrated high phenotypic and functional heterogeneity of placental CD8+ and CD4+ T cells. This work is currently being expanded to determine if the phenotype and function of fetus- and virus-specific placental T cells is differentially regulated to accommodate placental tolerance and immunity.